Sro1226_g254250.1 (Contig1389.g12816)

Aliases : Contig1389.g12816

Description : 12 kDa extrinsic protein, chloroplastic

Gene families : OG_01_0006557 (OrthoFinder) Phylogenetic Tree(s): OG0006557_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1226_g254250.1
Cluster	HCCA: Cluster_108

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000851.31	tig00000851_g4915.t1	Photosynthesis.photophosphorylation.photosystem II.PS-II...	0.03	OrthoFinder
EOD04610	No alias	Photosystem II PsbU, oxygen evolving complex [Interproscan].	0.11	OrthoFinder
EOD07444	No alias	Photosystem II PsbU, oxygen evolving complex [Interproscan].	0.11	OrthoFinder
EOD15138	No alias	Photosystem II PsbU, oxygen evolving complex [Interproscan].	0.11	OrthoFinder
PTI_04G05040.1	No alias	Photosystem II PsbU, oxygen evolving complex [Interproscan].	0.17	OrthoFinder
TP02G08090.1	No alias	Photosystem II PsbU, oxygen evolving complex [Interproscan].	0.25	OrthoFinder
lcl\|VRMN01000011.1_cds_KAA8491840.1_4848	KAA8491840	Photosystem II 12 kDa extrinsic protein, chloroplastic	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010109	regulation of photosynthesis	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0042548	regulation of photosynthesis, light reaction	None	Extended
BP	GO:0042549	photosystem II stabilization	IEA	Interproscan
BP	GO:0043467	regulation of generation of precursor metabolites and energy	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphatase activity	IEP	Enrichment
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	Enrichment
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Enrichment
BP	GO:0010024	phytochromobilin biosynthetic process	IEP	Enrichment
BP	GO:0010207	photosystem II assembly	IEP	Enrichment
MF	GO:0010242	oxygen evolving activity	IEP	Enrichment
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Enrichment
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Enrichment
BP	GO:0019684	photosynthesis, light reaction	IEP	Enrichment
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	Enrichment
MF	GO:0050897	cobalt ion binding	IEP	Enrichment
BP	GO:0051202	phytochromobilin metabolic process	IEP	Enrichment
MF	GO:0098809	nitrite reductase activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR010527	PSII_PsbU	57	145

External Links

No external refs found!