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  5. Sro1212_g252890.1

Sro1212_g252890.1 (Contig211.g2508)


Aliases : Contig211.g2508

Description : Hypothetical protein


Gene families : OG_01_0000436 (OrthoFinder) Phylogenetic Tree(s): OG0000436_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1212_g252890.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
Sro1091_g240290.1 Contig2884.g23030 Hypothetical protein 0.08 OrthoFinder
Sro1091_g240300.1 Contig2884.g23031 Hypothetical protein 0.07 OrthoFinder
Sro1193_g251190.1 Contig4499.g33742 Hypothetical protein 0.03 OrthoFinder
Sro1193_g251200.1 Contig4499.g33743 Hypothetical protein 0.04 OrthoFinder
Sro1212_g252900.1 Contig211.g2509 Hypothetical protein 0.05 OrthoFinder
Sro1249_g256020.1 Contig2393.g19615 Hypothetical protein 0.04 OrthoFinder
Sro1279_g258880.1 Contig4725.g35081 Hypothetical protein 0.03 OrthoFinder
Sro1491_g277090.1 Contig3009.g24026 Hypothetical protein 0.06 OrthoFinder
Sro1676_g290510.1 Contig3487.g27040 Hypothetical protein 0.03 OrthoFinder
Sro263_g102320.1 Contig612.g7554 Hypothetical protein 0.03 OrthoFinder
Sro332_g119410.1 Contig1165.g11128 Hypothetical protein 0.04 OrthoFinder
Sro605_g174210.1 Contig514.g6787 Hypothetical protein 0.04 OrthoFinder
Sro760_g198310.1 Contig3371.g26392 Hypothetical protein 0.04 OrthoFinder
Sro760_g198310.2 No alias Hypothetical protein 0.03 OrthoFinder
Sro768_g199580.1 Contig2130.g17963 Hypothetical protein 0.04 OrthoFinder
Sro797_g203930.1 Contig4746.g35169 Hypothetical protein 0.02 OrthoFinder
Sro922_g220650.1 Contig2958.g23508 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000150 DNA strand exchange activity IEP Enrichment
MF GO:0001733 galactosylceramide sulfotransferase activity IEP Enrichment
CC GO:0005794 Golgi apparatus IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008146 sulfotransferase activity IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0050694 galactose 3-O-sulfotransferase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!