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  5. Sro120_g058520.1

Sro120_g058520.1 (Contig2411.g19730)


Aliases : Contig2411.g19730

Description : Hypothetical protein


Gene families : OG_01_0000438 (OrthoFinder) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro120_g058520.1
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
Sro1224_g254020.1 Contig293.g3826 Hypothetical protein 0.02 OrthoFinder
Sro1252_g256220.1 Contig3295.g25873 Hypothetical protein 0.02 OrthoFinder
Sro1897_g304100.1 Contig2567.g20852 Hypothetical protein 0.25 OrthoFinder
Sro254_g100210.1 Contig387.g5216 Hypothetical protein 0.02 OrthoFinder
Sro3025_g342310.1 Contig3340.g26189 Hypothetical protein 0.01 OrthoFinder
Sro3517_g348800.1 Contig2288.g18914 Hypothetical protein 0.02 OrthoFinder
Sro877_g214700.1 Contig139.g1551 Hypothetical protein 0.11 OrthoFinder
Sro903_g218280.1 Contig3909.g29968 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment

No InterPro domains available for this sequence

No external refs found!