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  5. Sro1208_g252550.1

Sro1208_g252550.1 (Contig2577.g20928)


Aliases : Contig2577.g20928

Description : MSMEG_5435/MSMEI_5285


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1208_g252550.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Sro1326_g263050.1 Contig231.g2780 Putative fatty-acid--CoA ligase FadD21 0.04 OrthoFinder
Sro433_g141750.1 Contig4540.g33937 D-alanine--D-alanyl carrier protein ligase 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 8 235
No external refs found!