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  5. Sro1207_g252450.1

Sro1207_g252450.1 (Contig242.g2948)


Aliases : Contig242.g2948

Description : B binding protein L1818, chloroplastic


Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1207_g252450.1
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
Cre08.g365900 30773702, LHCSR1 Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder
Cz16g02040.t1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
EOD03771 No alias Light-harvesting family [Ensembl]. 0.03 OrthoFinder
EOD03774 No alias Light-harvesting family [Ensembl]. 0.02 OrthoFinder
EOD08607 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD15375 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
EOD20807 No alias Chlorophyll A-B binding protein [Interproscan]. 0.02 OrthoFinder
EOD20809 No alias Light harvesting protein [Ensembl]. 0.02 OrthoFinder
OT_05G01810.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.01 OrthoFinder
PTI_01G10030.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_02G03310.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_05G00320.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
PTI_14G03460.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
Sro122_g059170.1 Contig71.g736 Chloroplastic 0.02 OrthoFinder
Sro149_g068330.1 Contig259.g3201 Chloroplastic 0.03 OrthoFinder
TP19G02190.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP23G01260.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.04 OrthoFinder
TP23G01270.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder
TP23G01280.1 No alias Chlorophyll A-B binding protein [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 22 147
No external refs found!