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  5. Sro11_g008450.1

Sro11_g008450.1 (Contig724.g8319)


Aliases : Contig724.g8319

Description : D-alanine--D-alanyl carrier protein ligase


Gene families : OG_01_0000117 (OrthoFinder) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro11_g008450.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Sro11_g008500.1 Contig724.g8324 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro193_g082610.1 Contig826.g9160 D-alanine--D-alanyl carrier protein ligase 0.02 OrthoFinder
Sro1945_g306950.1 Contig3128.g24828 Putative fatty-acid--CoA ligase FadD21 0.03 OrthoFinder
Sro2284_g321900.1 Contig2109.g17902 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder
Sro571_g168700.1 Contig3541.g27383 D-alanine--D-alanyl carrier protein ligase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
BP GO:0034508 centromere complex assembly IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 13 432
No external refs found!