1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro118_g057730.1

Sro118_g057730.1 (Contig2714.g21843)


Aliases : Contig2714.g21843

Description : LRR receptor-like serine threonine-protein kinase At4g08850


Gene families : OG_01_0000335 (OrthoFinder) Phylogenetic Tree(s): OG0000335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro118_g057730.1
Cluster HCCA: Cluster_332

Target Alias Description ECC score Gene Family Method Actions
Sro1011_g231120.1 Contig997.g10085 LRR receptor-like serine threonine-protein kinase 0.04 OrthoFinder
Sro118_g057760.1 Contig2714.g21846 Leucine Rich Repeat 0.03 OrthoFinder
Sro1555_g282120.1 Contig2965.g23558 Leucine Rich Repeat 0.03 OrthoFinder
Sro1637_g287620.1 Contig4007.g30810 STYKc 0.05 OrthoFinder
Sro2100_g314470.1 Contig2796.g22494 Leucine rich repeat 0.04 OrthoFinder
Sro213_g088550.1 Contig1149.g10995 Leucine Rich Repeat 0.03 OrthoFinder
Sro2299_g322480.1 Contig2651.g21423 STYKc 0.05 OrthoFinder
Sro33_g021400.1 Contig2613.g21161 Receptor-like protein kinase 0.03 OrthoFinder
Sro3525_g348920.1 Contig1800.g15879 Hypothetical protein 0.03 OrthoFinder
Sro493_g154020.1 Contig1170.g11134 Leucine Rich Repeat 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0003972 RNA ligase (ATP) activity IEP Enrichment
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006013 mannose metabolic process IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment

No InterPro domains available for this sequence

No external refs found!