1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1178_g249500.1

Sro1178_g249500.1 (Contig1120.g10721)


Aliases : Contig1120.g10721

Description : CAMP-specific 3',5'-cyclic phosphodiesterase


Gene families : OG_01_0000012 (OrthoFinder) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1178_g249500.1
Cluster HCCA: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
Cz05g05230.t1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
Cz08g02140.t1 No alias 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
Dusal.0444s00002.1 33192966 3'5'-cyclic nucleotide phosphodiesterase, catalytic... 0.02 OrthoFinder
lcl|BLLF01000243.1_cds_GFH09543.1_4020 HaLaN_04710, GFH09543 3'5'-cyclic nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01001596.1_cds_GFH20210.1_14687 HaLaN_17293, GFH20210 3',5'-cyclic-nucleotide phosphodiesterase 0.01 OrthoFinder
lcl|BLLF01002475.1_cds_GFH24218.1_18695 HaLaN_21966, GFH24218 Phosphodiesterase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
MF GO:0004376 glycolipid mannosyltransferase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006497 protein lipidation IEP Enrichment
BP GO:0006505 GPI anchor metabolic process IEP Enrichment
BP GO:0006506 GPI anchor biosynthetic process IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0051751 alpha-1,4-mannosyltransferase activity IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002073 PDEase_catalytic_dom 109 245
No external refs found!