1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1177_g249450.1

Sro1177_g249450.1 (Contig1274.g11886)


Aliases : Contig1274.g11886

Description : Protein L24


Gene families : OG_01_0001143 (OrthoFinder) Phylogenetic Tree(s): OG0001143_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1177_g249450.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000455.16 tig00000455_g1004.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020554.24 tig00020554_g10809.t1 No description available 0.02 OrthoFinder
Cre07.g330450 30774865 Protein biosynthesis.organelle translation... 0.05 OrthoFinder
Cre16.g652550 30778177, PRPL24 Protein biosynthesis.organelle translation... 0.09 OrthoFinder
Cz13g14230.t1 No alias Ribosomal protein L24 [Interproscan]. 0.04 OrthoFinder
Cz13g16170.t1 No alias KOW; Ribosomal protein L24 [Interproscan]. 0.02 OrthoFinder
Dusal.0030s00023.1 33195298 KOW; Ribosomal protein L24 [Interproscan]. 0.02 OrthoFinder
EOD36197 No alias Ribosomal protein L24 [Interproscan]. 0.04 OrthoFinder
OT_11G00790.1 No alias Ribosomal protein L24 [Interproscan]. 0.06 OrthoFinder
Sro51_chlor_g029590.1 Rpl24 Rpl24 0.04 OrthoFinder
XM_002504485.1 MICPUN_106019, 106019 KOW; Ribosomal protein L24 [Interproscan]. 0.01 OrthoFinder
XM_002509009.1 MICPUN_109273, 109273 Ribosomal protein L24 [Interproscan]. 0.06 OrthoFinder
XM_003059801.1 MicpuC2_18221, 18221 Ribosomal protein L24; KOW [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000635.1_cds_GFH13638.1_8115 HaLaN_09566, GFH13638 KOW domain-containing protein 0.06 OrthoFinder
lcl|LHPG02000022.1_cds_PRW20692.1_5226 PRW20692 50S ribosomal chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
CC GO:0000313 organellar ribosome IEP Enrichment
CC GO:0000814 ESCRT II complex IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008199 ferric iron binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
CC GO:0016592 mediator complex IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0030488 tRNA methylation IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0034708 methyltransferase complex IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
CC GO:0043527 tRNA methyltransferase complex IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
CC GO:0072546 EMC complex IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
InterPro domains Description Start Stop
IPR003256 Ribosomal_L24 71 136
No external refs found!