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  5. Sro1177_g249420.1

Sro1177_g249420.1 (Contig1274.g11883)


Aliases : Contig1274.g11883

Description : Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1


Gene families : OG_01_0000074 (OrthoFinder) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1177_g249420.1
Cluster HCCA: Cluster_310

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000989.10 tig00000989_g6084.t1 No description available 0.03 OrthoFinder
Cpa|evm.model.tig00001126.11 tig00001126_g7122.t1 Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1... 0.04 OrthoFinder
Cre02.g079300 30786252, VPS4 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder
Dusal.0027s00019.1 33191576 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
Dusal.0273s00012.1 33201816 ATPase, AAA-type, core; Vps4 oligomerisation, C-terminal... 0.01 OrthoFinder
OT_10G00610.1 No alias MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.02 OrthoFinder
PTI_27G00180.1 No alias AAA ATPase, AAA+ lid domain; MIT; ATPase, AAA-type,... 0.03 OrthoFinder
Transcript_contig_54972 54972 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.01 OrthoFinder
Transcript_contig_59114 59114 ATPase, AAA-type, core [Interproscan]. 0.01 OrthoFinder
XM_002504323.1 MICPUN_113360, 113360 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.02 OrthoFinder
XM_003064781.1 MicpuC2_67802, 67802 MIT; ATPase, AAA-type, core; Vps4 oligomerisation,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
InterPro domains Description Start Stop
IPR007330 MIT_dom 7 70
IPR015415 Vps4_C 392 443
IPR003959 ATPase_AAA_core 160 291
No external refs found!