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  5. Sro1177_g249320.1

Sro1177_g249320.1 (Contig1274.g11873)


Aliases : Contig1274.g11873

Description : Synthetase cytosolic isozyme


Gene families : OG_01_0000946 (OrthoFinder) Phylogenetic Tree(s): OG0000946_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1177_g249320.1

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021319.42 tig00021319_g20236.t1 Nutrient uptake.nitrogen assimilation.ammonium... 0.01 OrthoFinder
SymbC1.scaffold1332.8 1332.8 Glutamine synthetase, catalytic domain [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold16183.1 16183.1 Hypothetical protein 0.01 OrthoFinder
Vocar.0028s0089.1 32895545 Glutamine synthetase, beta-Grasp domain; Glutamine... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009539 photosystem II reaction center IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR008146 Gln_synth_cat_dom 10 146
No external refs found!