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  5. Sro116_g057100.1

Sro116_g057100.1 (Contig2228.g18486)


Aliases : Contig2228.g18486

Description : Hypothetical protein


Gene families : OG_01_0000754 (OrthoFinder) Phylogenetic Tree(s): OG0000754_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro116_g057100.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Sro1259_g256891.1 No alias Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder
Sro1262_g257090.1 Contig187.g2166 Hypothetical protein 0.02 OrthoFinder
Sro2988_g341730.1 Contig1825.g16064 Harbinger transposase-derived nuclease domain [Interproscan]. 0.03 OrthoFinder
Sro608_g174820.1 Contig3978.g30565 Harbinger transposase-derived nuclease domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006480 N-terminal protein amino acid methylation IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0031365 N-terminal protein amino acid modification IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!