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  5. Sro1161_g247820.1

Sro1161_g247820.1 (Contig369.g4994)


Aliases : Contig369.g4994

Description : BTB/Kelch-associated [Interproscan].


Gene families : OG_01_0000120 (OrthoFinder) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1161_g247820.1
Cluster HCCA: Cluster_240

Target Alias Description ECC score Gene Family Method Actions
Sro118_g057840.1 Contig2714.g21854 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro131_g062310.1 Contig67.g683 BACK 0.04 OrthoFinder
Sro1526_g279770.1 Contig1576.g14318 BTB/POZ domain [Interproscan]. 0.04 OrthoFinder
Sro1842_g301050.1 Contig2247.g18620 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro2360_g324732.1 No alias BTB/POZ domain [Interproscan]. 0.02 OrthoFinder
Sro2533_g330460.1 Contig379.g5092 BACK 0.04 OrthoFinder
Sro272_g104960.1 Contig2144.g18037 Hypothetical protein 0.05 OrthoFinder
Sro550_g164720.1 Contig731.g8402 BACK 0.03 OrthoFinder
Sro701_g189850.1 Contig2013.g17196 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro791_g203010.1 Contig1638.g14767 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro898_g217661.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro89_g046850.1 Contig3846.g29606 BTB/POZ domain [Interproscan]. 0.03 OrthoFinder
Sro900_g217860.1 Contig2813.g22564 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR011705 BACK 157 243
No external refs found!