1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro1159_g247620.1

Sro1159_g247620.1 (Contig4112.g31380)


Aliases : Contig4112.g31380

Description : Peroxisomal membrane protein


Gene families : OG_01_0000041 (OrthoFinder) Phylogenetic Tree(s): OG0000041_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1159_g247620.1
Cluster HCCA: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.147 tig00000241_g21012.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00000912.38 tig00000912_g5444.t1 No description available 0.02 OrthoFinder
Cre06.g278800 30778836 No description available 0.02 OrthoFinder
Cz04g05160.t1 No alias Mpv17/PMP22 [Interproscan]. 0.02 OrthoFinder
Cz15g09050.t1 No alias Hypothetical protein 0.01 OrthoFinder
XM_003059506.1 MicpuC2_40278, 40278 Peroxisomal membrane protein (PMP22) 0.01 OrthoFinder
lcl|BLLF01002216.1_cds_GFH23205.1_17682 HaLaN_20785, GFH23205 40S ribosomal protein S17 0.01 OrthoFinder
lcl|LHPG02000018.1_cds_PRW32981.1_3838 PRW32981 Peroxisomal membrane 0.01 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8493063.1_2799 KAA8493063 Protein sym1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0002949 tRNA threonylcarbamoyladenosine modification IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0070525 tRNA threonylcarbamoyladenosine metabolic process IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!