1. Home
  2. Species
  3. Seminavis robusta
  4. Sequence
  5. Sro114_g056450.1

Sro114_g056450.1 (Contig1482.g13545)


Aliases : Contig1482.g13545

Description : Hedgehog protein, Hint domain [Interproscan].


Gene families : OG_01_0001040 (OrthoFinder) Phylogenetic Tree(s): OG0001040_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro114_g056450.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Sro1246_g255810.1 Contig800.g8978 Peptidase S8 and S53, subtilisin, kexin, sedolisin 0.03 OrthoFinder
Sro421_g139550.1 Contig1157.g11068 Hint module 0.03 OrthoFinder
Sro46_g027430.1 Contig1636.g14733 Protein hedgehog 0.03 OrthoFinder
Sro951_g223890.1 Contig3277.g25787 Hypothetical protein 0.05 OrthoFinder
Sro99_g050740.1 Contig1378.g12645 Desert hedgehog protein 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0016540 protein autoprocessing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005789 endoplasmic reticulum membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
InterPro domains Description Start Stop
IPR001767 Hedgehog_Hint 195 357
No external refs found!