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  5. Sro114_g056230.1

Sro114_g056230.1 (Contig1482.g13523)


Aliases : Contig1482.g13523

Description : Hypothetical protein


Gene families : OG_01_0001104 (OrthoFinder) Phylogenetic Tree(s): OG0001104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro114_g056230.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Sro126_g060500.1 Contig82.g867 Hypothetical protein 0.08 OrthoFinder
Sro191_g082290.1 Contig2614.g21222 Hypothetical protein 0.03 OrthoFinder
Sro2244_g320500.1 Contig1737.g15484 Hypothetical protein 0.02 OrthoFinder
Sro227_g092400.1 Contig327.g4352 Hypothetical protein 0.07 OrthoFinder
Sro3044_g342720.1 Contig1018.g10186 Hypothetical protein 0.05 OrthoFinder
Sro3135_g344340.1 Contig4150.g31677 Hypothetical protein 0.04 OrthoFinder
Sro327_g118510.1 Contig839.g9259 Hypothetical protein 0.04 OrthoFinder
Sro458_g147190.1 Contig3230.g25551 Hypothetical protein 0.07 OrthoFinder
Sro703_g190160.1 Contig314.g4184 Hypothetical protein 0.11 OrthoFinder
Sro901_g217940.1 Contig2989.g23738 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment

No InterPro domains available for this sequence

No external refs found!