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  5. Sro1143_g245910.1

Sro1143_g245910.1 (Contig934.g9717)


Aliases : Contig934.g9717

Description : Methyltransferase domain [Interproscan].


Gene families : OG_01_0001870 (OrthoFinder) Phylogenetic Tree(s): OG0001870_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1143_g245910.1
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
PTI_04G01480.1 No alias Methyltransferase domain [Interproscan]. 0.02 OrthoFinder
PTI_24G00360.1 No alias Methyltransferase domain [Interproscan]. 0.02 OrthoFinder
Sro337_g120610.1 Contig2800.g22519 Methyltransferase domain [Interproscan]. 0.03 OrthoFinder
Sro596_g172740.1 Contig2605.g21078 Methyltransferase domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000339 RNA cap binding IEP Enrichment
MF GO:0000340 RNA 7-methylguanosine cap binding IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR025714 Methyltranfer_dom 107 385
No external refs found!