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  5. Sro1142_g245790.1

Sro1142_g245790.1 (Contig2104.g17868)


Aliases : Contig2104.g17868

Description : COBW domain-containing protein


Gene families : OG_01_0000111 (OrthoFinder) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1142_g245790.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
EOD18204 No alias Cobalamin synthesis protein P47K [Ensembl]. 0.02 OrthoFinder
SymbC1.scaffold3924.2 3924.2 Cobalamin (vitamin B12) biosynthesis CobW-like,... 0.01 OrthoFinder
XM_002504032.1 MICPUN_60337, 60337 CobW/HypB/UreG, nucleotide-binding domain; Cobalamin... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
CC GO:0035145 exon-exon junction complex IEP Enrichment
InterPro domains Description Start Stop
IPR011629 Cbl_biosynth_CobW-like_C 399 488
IPR003495 CobW/HypB/UreG_dom 60 245
No external refs found!