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  5. Sro1131_g244680.1

Sro1131_g244680.1 (Contig1944.g16712)


Aliases : Contig1944.g16712

Description : Helicase


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1131_g244680.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2314.2 2314.2 Helicase/UvrB, N-terminal; Helicase-associated;... 0.01 OrthoFinder
TP02G02930.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
TP03G04350.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
TP14G03000.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 111 173
IPR005114 Helicase_assoc 29 95
IPR005114 Helicase_assoc 179 235
No external refs found!