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  5. Sro112_g055840.1

Sro112_g055840.1 (Contig1575.g14309)


Aliases : Contig1575.g14309

Description : Hemolysin-type calcium-binding repeat (2 copies)


Gene families : OG_01_0006177 (OrthoFinder) Phylogenetic Tree(s): OG0006177_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro112_g055840.1
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Sro112_g055850.1 Contig1575.g14310 ECF subfamily RNA polymerase sigma-24 subunit 0.05 OrthoFinder
Sro46_g027510.1 Contig1636.g14741 Hypothetical protein 0.05 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!