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  5. Sro1128_g244291.1

Sro1128_g244291.1


Description : Hypothetical protein


Gene families : OG_01_0000236 (OrthoFinder) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1128_g244291.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
Sro105_g053231.1 No alias Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
Sro1339_g264281.1 No alias Leucine-rich repeat [Interproscan]. 0.03 OrthoFinder
Sro1423_g271380.1 Contig94.g1083 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro1813_g299291.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro2124_g315620.1 Contig3835.g29498 Hypothetical protein 0.03 OrthoFinder
Sro2443_g327851.1 No alias Hypothetical protein 0.03 OrthoFinder
Sro2609_g332490.1 Contig2575.g20916 LRR receptor-like serine threonine-protein kinase 0.03 OrthoFinder
Sro3848_g351441.1 No alias Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008173 RNA methyltransferase activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!