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  5. Sro1118_g243070.1

Sro1118_g243070.1 (Contig728.g8385)


Aliases : Contig728.g8385

Description : Zinc finger, MYND-type [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1118_g243070.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000737.18 tig00000737_g3797.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00020563.9 tig00020563_g11190.t1 No description available 0.02 OrthoFinder
Transcript_contig_59153 59153 SET domain [Interproscan]. 0.01 OrthoFinder
Vocar.0041s0051.1 32888761 SET domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44877.1_1772 PRW44877 Histone-lysine N-methyltransferase ATXR4 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
InterPro domains Description Start Stop
IPR002893 Znf_MYND 471 512
No external refs found!