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  5. Sro10_g007800.1

Sro10_g007800.1 (Contig1.g4)


Aliases : Contig1.g4

Description : 50S ribosomal protein L11


Gene families : OG_01_0001071 (OrthoFinder) Phylogenetic Tree(s): OG0001071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro10_g007800.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
Cre10.g423650 30790265, PRPL11 Protein biosynthesis.organelle translation... 0.02 OrthoFinder
EOD25013 No alias Ribosomal protein L11, C-terminal; Ribosomal protein... 0.03 OrthoFinder
EOD40511 No alias 50S ribosomal protein L11 [Ensembl]. 0.03 OrthoFinder
OT_14G01140.1 No alias Ribosomal protein L11, N-terminal; Ribosomal protein... 0.02 OrthoFinder
XM_002505743.1 MICPUN_92304, 92304 Ribosomal protein L11, N-terminal; Ribosomal protein... 0.02 OrthoFinder
XM_003057347.1 MicpuC2_70704, 70704 Mitochondrial ribosomal protein L11 (RPL11M) 0.02 OrthoFinder
lcl|BLLF01005196.1_cds_GFH30861.1_25338 HaLaN_29790, GFH30861 50S ribosomal protein L11 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
MF GO:0046923 ER retention sequence binding IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 4 66
IPR020783 Ribosomal_L11_C 71 142
No external refs found!