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  5. Sro1087_g239800.1

Sro1087_g239800.1 (Contig998.g10087)


Aliases : Contig998.g10087

Description : MYND-like zinc finger, mRNA-binding [Interproscan].


Gene families : OG_01_0000887 (OrthoFinder) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1087_g239800.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Sro1418_g270940.1 Contig4752.g35210 Hypothetical protein 0.03 OrthoFinder
Sro374_g129190.1 Contig347.g4680 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006401 RNA catabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0019439 aromatic compound catabolic process IEP Enrichment
CC GO:0032299 ribonuclease H2 complex IEP Enrichment
BP GO:0034655 nucleobase-containing compound catabolic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0046700 heterocycle catabolic process IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901361 organic cyclic compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR031615 Zfn-C6H2 30 67
No external refs found!