Aliases : Contig3162.g25056
Description : Extracellular solute-binding protein
Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro1084_g239490.1 | |
Cluster | HCCA: Cluster_271 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sro1067_g237390.1 | Contig2309.g19054 | Putative amino-acid ABC transporter-binding protein YhdW | 0.04 | OrthoFinder | |
Sro1903_g304520.1 | Contig4361.g32859 | Putative amino-acid ABC transporter-binding protein YhdW | 0.05 | OrthoFinder | |
Sro227_g092290.1 | Contig327.g4341 | Extracellular solute-binding protein | 0.03 | OrthoFinder | |
Sro2307_g322760.1 | Contig1768.g15637 | Putative amino-acid ABC transporter-binding protein YhdW | 0.03 | OrthoFinder | |
Sro238_g095580.1 | Contig99.g1204 | Extracellular solute-binding protein | 0.06 | OrthoFinder | |
Sro269_g104120.1 | Contig1337.g12333 | Extracellular solute-binding protein | 0.03 | OrthoFinder | |
Sro28_g018550.1 | Contig404.g5464 | Extracellular solute-binding protein | 0.07 | OrthoFinder | |
Sro441_g143660.1 | Contig470.g6380 | Extracellular solute-binding protein | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003677 | DNA binding | IEP | Enrichment |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
MF | GO:0005488 | binding | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
CC | GO:0018995 | host cellular component | IEP | Enrichment |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
CC | GO:0033643 | host cell part | IEP | Enrichment |
CC | GO:0033646 | host intracellular part | IEP | Enrichment |
CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
BP | GO:0065007 | biological regulation | IEP | Enrichment |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
No external refs found! |