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  5. Sro1080_g238970.1

Sro1080_g238970.1 (Contig43.g296)


Aliases : Contig43.g296

Description : (Lipo)protein


Gene families : OG_01_0001739 (OrthoFinder) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1080_g238970.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Sro1173_g248950.1 Contig4697.g34914 (Lipo)protein 0.03 OrthoFinder
Sro193_g082650.1 Contig826.g9164 Inherit from NOG: (LipO)protein 0.03 OrthoFinder
Sro234_g094410.1 Contig3223.g25488 Mycoplasma protein of unknown function, DUF285 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004842 ubiquitin-protein transferase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0016567 protein ubiquitination IEP Enrichment
MF GO:0019787 ubiquitin-like protein transferase activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0032446 protein modification by small protein conjugation IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR005046 DUF285 92 185
No external refs found!