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  5. Sro1077_g238560.1

Sro1077_g238560.1 (Contig4562.g34083)


Aliases : Contig4562.g34083

Description : Hypothetical protein


Gene families : OG_01_0000172 (OrthoFinder) Phylogenetic Tree(s): OG0000172_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1077_g238560.1

Target Alias Description ECC score Gene Family Method Actions
Sro1077_g238550.1 Contig4562.g34082 Hypothetical protein 0.04 OrthoFinder
Sro1079_g238930.1 Contig298.g3930 Hypothetical protein 0.07 OrthoFinder
Sro1210_g252710.1 Contig2015.g17237 Hypothetical protein 0.02 OrthoFinder
Sro149_g068550.1 Contig259.g3223 Hypothetical protein 0.05 OrthoFinder
Sro1698_g291940.1 Contig1874.g16366 Hypothetical protein 0.07 OrthoFinder
Sro2218_g319500.1 Contig3225.g25506 Hypothetical protein 0.04 OrthoFinder
Sro2222_g319660.1 Contig2106.g17888 Hypothetical protein 0.03 OrthoFinder
Sro227_g092310.1 Contig327.g4343 Hypothetical protein 0.07 OrthoFinder
Sro3152_g344510.1 Contig938.g9747 Hypothetical protein 0.02 OrthoFinder
Sro4503_g354160.1 Contig4238.g32111 Hypothetical protein 0.03 OrthoFinder
Sro722_g192800.1 Contig2490.g20400 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!