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  5. Sro1074_g238280.1

Sro1074_g238280.1 (Contig4290.g32412)


Aliases : Contig4290.g32412

Description : Hypothetical protein


Gene families : OG_01_0001105 (OrthoFinder) Phylogenetic Tree(s): OG0001105_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1074_g238280.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Sro1188_g250620.1 Contig3566.g27554 Hypothetical protein 0.03 OrthoFinder
Sro1408_g270100.1 Contig2286.g18911 Hypothetical protein 0.03 OrthoFinder
Sro1450_g273740.1 Contig4095.g31278 Hypothetical protein 0.04 OrthoFinder
Sro152_g069560.1 Contig69.g716 Hypothetical protein 0.07 OrthoFinder
Sro1736_g294380.1 Contig3231.g25553 Hypothetical protein 0.04 OrthoFinder
Sro1875_g303030.1 Contig3877.g29823 Hypothetical protein 0.03 OrthoFinder
Sro2330_g323590.1 Contig817.g9105 Hypothetical protein 0.06 OrthoFinder
Sro336_g120320.1 Contig4022.g30921 Hypothetical protein 0.03 OrthoFinder
Sro482_g151810.1 Contig232.g2791 Hypothetical protein 0.07 OrthoFinder
Sro59_g034000.1 Contig571.g7246 Hypothetical protein 0.06 OrthoFinder
Sro72_g040050.1 Contig1459.g13404 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004520 endodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0030638 polyketide metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!