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Aliases : Contig2309.g19054
Description : Putative amino-acid ABC transporter-binding protein YhdW
Gene families : OG_01_0000402 (OrthoFinder) Phylogenetic Tree(s): OG0000402_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sro1067_g237390.1 | |
| Cluster | HCCA: Cluster_272 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro1084_g239490.1 | Contig3162.g25056 | Extracellular solute-binding protein | 0.04 | OrthoFinder | |
| Sro1105_g241930.1 | Contig2574.g20912 | Putative amino-acid ABC transporter-binding protein YhdW | 0.04 | OrthoFinder | |
| Sro1292_g259960.1 | Contig3668.g28337 | Extracellular solute-binding protein | 0.05 | OrthoFinder | |
| Sro1411_g270440.1 | Contig2736.g22026 | Extracellular solute-binding protein | 0.03 | OrthoFinder | |
| Sro1536_g280610.1 | Contig2003.g17144 | Extracellular solute-binding protein | 0.03 | OrthoFinder | |
| Sro1903_g304520.1 | Contig4361.g32859 | Putative amino-acid ABC transporter-binding protein YhdW | 0.03 | OrthoFinder | |
| Sro2384_g325690.1 | Contig2856.g22895 | Extracellular solute-binding protein | 0.04 | OrthoFinder | |
| Sro238_g095580.1 | Contig99.g1204 | Extracellular solute-binding protein | 0.05 | OrthoFinder | |
| Sro269_g104120.1 | Contig1337.g12333 | Extracellular solute-binding protein | 0.04 | OrthoFinder | |
| Sro2718_g335420.1 | Contig1422.g13112 | Extracellular solute-binding protein | 0.03 | OrthoFinder | |
| Sro3494_g348610.1 | Contig3168.g25076 | Extracellular solute-binding protein | 0.07 | OrthoFinder | |
| Sro474_g150170.2 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| Sro474_g150180.1 | Contig2775.g22314 | Putative amino-acid ABC transporter-binding protein YhdW | 0.04 | OrthoFinder | |
| Sro73_g040260.1 | Contig3929.g30127 | Putative amino-acid ABC transporter-binding protein YhdW | 0.05 | OrthoFinder | |
| Sro859_g211980.1 | Contig1286.g12005 | Extracellular solute-binding protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
| MF | GO:0003847 | 1-alkyl-2-acetylglycerophosphocholine esterase activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0007165 | signal transduction | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0016042 | lipid catabolic process | IEP | Enrichment |
| MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
| CC | GO:0018995 | host cellular component | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| CC | GO:0033643 | host cell part | IEP | Enrichment |
| CC | GO:0033646 | host intracellular part | IEP | Enrichment |
| CC | GO:0033647 | host intracellular organelle | IEP | Enrichment |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Enrichment |
| BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
| CC | GO:0042025 | host cell nucleus | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
| MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |