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  5. Sro105_g053090.1

Sro105_g053090.1 (Contig544.g6998)


Aliases : Contig544.g6998

Description : CRAL-TRIO lipid binding domain [Interproscan].


Gene families : OG_01_0000045 (OrthoFinder) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro105_g053090.1
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Sro1103_g241671.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.05 OrthoFinder
Sro190_g082030.1 Contig3488.g27078 Hypothetical protein 0.02 OrthoFinder
Sro200_g084740.1 Contig201.g2365 Hypothetical protein 0.02 OrthoFinder
Sro205_g086350.1 Contig2217.g18448 CRAL-TRIO lipid binding domain [Interproscan]. 0.04 OrthoFinder
Sro2804_g337440.1 Contig2399.g19647 Hypothetical protein 0.02 OrthoFinder
Sro3332_g346900.1 Contig1403.g12872 CRAL-TRIO lipid binding domain [Interproscan]. 0.02 OrthoFinder
Sro534_g161811.1 No alias CRAL-TRIO lipid binding domain [Interproscan]. 0.03 OrthoFinder
Sro634_g178951.1 No alias Hypothetical protein 0.02 OrthoFinder
Sro697_g189130.1 Contig3345.g26212 Hypothetical protein 0.02 OrthoFinder
Sro74_g040870.1 Contig4700.g34949 Hypothetical protein 0.02 OrthoFinder
Sro796_g203650.1 Contig2034.g17463 Hypothetical protein 0.04 OrthoFinder
Sro98_g050560.1 Contig3362.g26348 Hypothetical protein 0.06 OrthoFinder
Sro98_g050570.1 Contig3362.g26349 Hypothetical protein 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008488 gamma-glutamyl carboxylase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0017187 peptidyl-glutamic acid carboxylation IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018200 peptidyl-glutamic acid modification IEP Enrichment
BP GO:0018214 protein carboxylation IEP Enrichment
BP GO:0019321 pentose metabolic process IEP Enrichment
BP GO:0019566 arabinose metabolic process IEP Enrichment
BP GO:0046373 L-arabinose metabolic process IEP Enrichment
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 138 221
No external refs found!