Sro1022_g232380.1 (Contig2862.g22952)

Aliases : Contig2862.g22952

Description : Protein S5

Gene families : OG_01_0000781 (OrthoFinder) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sro1022_g232380.1
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020531.55	tig00020531_g10061.t1	No description available	0.01	OrthoFinder
Cre09.g407100	30780731	No description available	0.06	OrthoFinder
Cre16.g659950	30778100, PRPS5	Protein biosynthesis.organelle translation...	0.05	OrthoFinder
Cz10g28050.t1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.01	OrthoFinder
Cz12g28110.t1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.03	OrthoFinder
EOD36000	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.01	OrthoFinder
OT_10G02160.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.03	OrthoFinder
OT_15G00990.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.05	OrthoFinder
PTI_01G06080.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.02	OrthoFinder
Sro51_chlor_g029640.1	Rps5	Rps5	0.04	OrthoFinder
SymbC1.scaffold2.900	2.900	Ribosomal protein S5, N-terminal; Ribosomal protein S5,...	0.01	OrthoFinder
TPCG02620.1	No alias	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.06	OrthoFinder
Transcript_contig_54625	54625	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.01	OrthoFinder
Vocar.0029s0076.1	32887394	Hypothetical protein	0.02	OrthoFinder
XM_002506775.1	MICPUN_92603, 92603	Ribosomal protein S5, N-terminal; Ribosomal protein S5,...	0.05	OrthoFinder
XM_003057718.1	MicpuC2_32996, 32996	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.02	OrthoFinder
XM_003061002.1	MicpuC2_48160, 48160	Ribosomal protein S5, C-terminal; Ribosomal protein S5,...	0.05	OrthoFinder
lcl\|LHPG02000012.1_cds_PRW44968.1_1935	PRW44968	30S ribosomal S5	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Enrichment
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
MF	GO:0003743	translation initiation factor activity	IEP	Enrichment
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	Enrichment
BP	GO:0006163	purine nucleotide metabolic process	IEP	Enrichment
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	Enrichment
BP	GO:0006188	IMP biosynthetic process	IEP	Enrichment
BP	GO:0006189	'de novo' IMP biosynthetic process	IEP	Enrichment
BP	GO:0006413	translational initiation	IEP	Enrichment
BP	GO:0006825	copper ion transport	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0008135	translation factor activity, RNA binding	IEP	Enrichment
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Enrichment
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Enrichment
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Enrichment
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Enrichment
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	Enrichment
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Enrichment
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Enrichment
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Enrichment
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Enrichment
BP	GO:0009259	ribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Enrichment
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Enrichment
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment
BP	GO:0019693	ribose phosphate metabolic process	IEP	Enrichment
BP	GO:0022607	cellular component assembly	IEP	Enrichment
BP	GO:0034220	ion transmembrane transport	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0035434	copper ion transmembrane transport	IEP	Enrichment
BP	GO:0043461	proton-transporting ATP synthase complex assembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
MF	GO:0045182	translation regulator activity	IEP	Enrichment
BP	GO:0046040	IMP metabolic process	IEP	Enrichment
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	Enrichment
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Enrichment
MF	GO:0051287	NAD binding	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	IEP	Enrichment
BP	GO:0072521	purine-containing compound metabolic process	IEP	Enrichment
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	Enrichment
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Enrichment
BP	GO:0098655	cation transmembrane transport	IEP	Enrichment
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Enrichment
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Enrichment
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013810	Ribosomal_S5_N	193	252
IPR005324	Ribosomal_S5_C	266	335

External Links

No external refs found!

Sro1022_g232380.1 (Contig2862.g22952)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation