Sro1022_g232380.1 (Contig2862.g22952)


Aliases : Contig2862.g22952

Description : Protein S5


Gene families : OG_01_0000781 (OrthoFinder) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1022_g232380.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020531.55 tig00020531_g10061.t1 No description available 0.01 OrthoFinder
Cre09.g407100 30780731 No description available 0.06 OrthoFinder
Cre16.g659950 30778100, PRPS5 Protein biosynthesis.organelle translation... 0.05 OrthoFinder
Cz10g28050.t1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.01 OrthoFinder
Cz12g28110.t1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.03 OrthoFinder
EOD36000 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.01 OrthoFinder
OT_10G02160.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.03 OrthoFinder
OT_15G00990.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.05 OrthoFinder
PTI_01G06080.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.02 OrthoFinder
Sro51_chlor_g029640.1 Rps5 Rps5 0.04 OrthoFinder
SymbC1.scaffold2.900 2.900 Ribosomal protein S5, N-terminal; Ribosomal protein S5,... 0.01 OrthoFinder
TPCG02620.1 No alias Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.06 OrthoFinder
Transcript_contig_54625 54625 Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.01 OrthoFinder
Vocar.0029s0076.1 32887394 Hypothetical protein 0.02 OrthoFinder
XM_002506775.1 MICPUN_92603, 92603 Ribosomal protein S5, N-terminal; Ribosomal protein S5,... 0.05 OrthoFinder
XM_003057718.1 MicpuC2_32996, 32996 Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.02 OrthoFinder
XM_003061002.1 MicpuC2_48160, 48160 Ribosomal protein S5, C-terminal; Ribosomal protein S5,... 0.05 OrthoFinder
lcl|LHPG02000012.1_cds_PRW44968.1_1935 PRW44968 30S ribosomal S5 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005375 copper ion transmembrane transporter activity IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006825 copper ion transport IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0035434 copper ion transmembrane transport IEP Enrichment
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 193 252
IPR005324 Ribosomal_S5_C 266 335
No external refs found!