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  5. Sro1022_g232310.1

Sro1022_g232310.1 (Contig2862.g22945)


Aliases : Contig2862.g22945

Description : PiggyBac transposable element-derived protein [Interproscan].


Gene families : OG_01_0002364 (OrthoFinder) Phylogenetic Tree(s): OG0002364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1022_g232310.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Sro1705_g292410.1 Contig4149.g31669 PiggyBac transposable element-derived protein [Interproscan]. 0.05 OrthoFinder
Sro1817_g299490.1 Contig1204.g11336 PiggyBac transposable element-derived protein [Interproscan]. 0.06 OrthoFinder
Sro2036_g312090.1 Contig118.g1341 Hypothetical protein 0.13 OrthoFinder
Sro33_g021190.1 Contig2613.g21140 PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
Sro347_g122870.1 Contig477.g6455 PiggyBac transposable element-derived protein [Interproscan]. 0.12 OrthoFinder
Sro347_g122880.1 Contig477.g6456 PiggyBac transposable element-derived protein [Interproscan]. 0.14 OrthoFinder
Sro3482_g348480.1 Contig1867.g16323 PiggyBac transposable element-derived protein [Interproscan]. 0.06 OrthoFinder
Sro354_g124780.2 No alias PiggyBac transposable element-derived protein [Interproscan]. 0.1 OrthoFinder
Sro477_g150790.1 Contig553.g7058 PiggyBac transposable element-derived protein 0.03 OrthoFinder
Sro540_g162980.1 Contig4704.g34987 PiggyBac transposable element-derived protein [Interproscan]. 0.03 OrthoFinder
Sro6_g005660.1 Contig175.g2071 Hypothetical protein 0.06 OrthoFinder
Sro845_g209950.1 Contig2192.g18247 Hypothetical protein 0.07 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006310 DNA recombination IEP Enrichment
InterPro domains Description Start Stop
IPR029526 PGBD 126 524
No external refs found!