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  5. Sro1010_g230850.1

Sro1010_g230850.1 (Contig4560.g34050)


Aliases : Contig4560.g34050

Description : Phytanoyl-CoA dioxygenase


Gene families : OG_01_0014712 (OrthoFinder) Phylogenetic Tree(s): OG0014712_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1010_g230850.1
Cluster HCCA: Cluster_332


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
MF GO:0008417 fucosyltransferase activity IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016866 intramolecular transferase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR008775 Phytyl_CoA_dOase 142 369
No external refs found!