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  5. Sro1010_g230810.1

Sro1010_g230810.1 (Contig4560.g34046)


Aliases : Contig4560.g34046

Description : Glutamate synthase 1 [NADH], chloroplastic


Gene families : OG_01_0000413 (OrthoFinder) Phylogenetic Tree(s): OG0000413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1010_g230810.1
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
Cre12.g514050 30792611, GSF1 Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder
Dusal.0052s00003.1 33199570 Glutamine amidotransferase type 2 domain; Glutamate... 0.02 OrthoFinder
Dusal.0806s00001.1 33190345 Glutamate synthase, central-N; Glutamine... 0.04 OrthoFinder
EOD23577 No alias Dihydroprymidine dehydrogenase domain II;... 0.02 OrthoFinder
EOD33253 No alias Dihydroprymidine dehydrogenase domain II;... 0.01 OrthoFinder
PTI_08G03700.1 No alias Dihydroprymidine dehydrogenase domain II;... 0.04 OrthoFinder
SymbC1.scaffold1423.11 1423.11 FAD/NAD(P)-binding domain; Dihydroprymidine... 0.01 OrthoFinder
SymbC1.scaffold588.8 588.8 Glutamate synthase, alpha subunit, C-terminal;... 0.01 OrthoFinder
TP06G05930.1 No alias Dihydroprymidine dehydrogenase domain II;... 0.03 OrthoFinder
TP13G02310.1 No alias Glutamate synthase, alpha subunit, C-terminal; Glutamate... 0.02 OrthoFinder
Vocar.0064s0005.1 32897716 Glutamate synthase, central-N; Dihydroprymidine... 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60858.1_4601 PRW60858 Glutamate synthase 1 [NADH] chloroplastic isoform X1 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004356 glutamate-ammonia ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009064 glutamine family amino acid metabolic process IEP Enrichment
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016211 ammonia ligase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR023753 FAD/NAD-binding_dom 218 399
IPR028261 DPD_II 106 203
No external refs found!