Aliases : Contig3320.g26058
Description : DDE superfamily endonuclease domain [Interproscan].
Gene families : OG_01_0004740 (OrthoFinder) Phylogenetic Tree(s): OG0004740_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sro1005_g230200.1 | |
Cluster | HCCA: Cluster_338 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Sro10_g007980.1 | Contig1.g22 | Hypothetical protein | 0.07 | OrthoFinder | |
Sro1465_g274990.1 | Contig1516.g13832 | DDE superfamily endonuclease domain [Interproscan]. | 0.1 | OrthoFinder | |
Sro1919_g305460.1 | Contig1207.g11350 | Hypothetical protein | 0.04 | OrthoFinder | |
Sro1919_g305470.1 | Contig1207.g11351 | Hypothetical protein | 0.09 | OrthoFinder | |
Sro237_g095260.1 | Contig1864.g16297 | Hypothetical protein | 0.11 | OrthoFinder | |
Sro271_g104720.1 | Contig2573.g20905 | DDE superfamily endonuclease domain [Interproscan]. | 0.06 | OrthoFinder | |
Sro2986_g341660.1 | Contig224.g2648 | Hypothetical protein | 0.06 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000287 | magnesium ion binding | IEP | Enrichment |
BP | GO:0000723 | telomere maintenance | IEP | Enrichment |
MF | GO:0003678 | DNA helicase activity | IEP | Enrichment |
MF | GO:0004386 | helicase activity | IEP | Enrichment |
BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
BP | GO:0006281 | DNA repair | IEP | Enrichment |
BP | GO:0006310 | DNA recombination | IEP | Enrichment |
BP | GO:0006950 | response to stress | IEP | Enrichment |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
BP | GO:0006996 | organelle organization | IEP | Enrichment |
MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
BP | GO:0016043 | cellular component organization | IEP | Enrichment |
MF | GO:0016887 | ATPase | IEP | Enrichment |
BP | GO:0032200 | telomere organization | IEP | Enrichment |
BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
BP | GO:0042592 | homeostatic process | IEP | Enrichment |
BP | GO:0050896 | response to stimulus | IEP | Enrichment |
BP | GO:0051276 | chromosome organization | IEP | Enrichment |
BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
BP | GO:0060249 | anatomical structure homeostasis | IEP | Enrichment |
BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004875 | DDE_SF_endonuclease_dom | 474 | 582 |
No external refs found! |