Sro1005_g230200.1 (Contig3320.g26058)


Aliases : Contig3320.g26058

Description : DDE superfamily endonuclease domain [Interproscan].


Gene families : OG_01_0004740 (OrthoFinder) Phylogenetic Tree(s): OG0004740_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sro1005_g230200.1
Cluster HCCA: Cluster_338

Target Alias Description ECC score Gene Family Method Actions
Sro10_g007980.1 Contig1.g22 Hypothetical protein 0.07 OrthoFinder
Sro1465_g274990.1 Contig1516.g13832 DDE superfamily endonuclease domain [Interproscan]. 0.1 OrthoFinder
Sro1919_g305460.1 Contig1207.g11350 Hypothetical protein 0.04 OrthoFinder
Sro1919_g305470.1 Contig1207.g11351 Hypothetical protein 0.09 OrthoFinder
Sro237_g095260.1 Contig1864.g16297 Hypothetical protein 0.11 OrthoFinder
Sro271_g104720.1 Contig2573.g20905 DDE superfamily endonuclease domain [Interproscan]. 0.06 OrthoFinder
Sro2986_g341660.1 Contig224.g2648 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR004875 DDE_SF_endonuclease_dom 474 582
No external refs found!