lcl|VRMN01000028.1_cds_KAA8490419.1_5042 (KAA8490419)


Aliases : KAA8490419

Description : Hypothetical protein


Gene families : OG_01_0003897 (OrthoFinder) Phylogenetic Tree(s): OG0003897_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000028.1_cds_KAA8490419.1_5042
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Sro110_g055020.1 Contig1501.g13725 HEAT repeat [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
CC GO:0000313 organellar ribosome IEP Enrichment
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
CC GO:0005739 mitochondrion IEP Enrichment
CC GO:0005761 mitochondrial ribosome IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0031419 cobalamin binding IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0042558 pteridine-containing compound metabolic process IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment

No InterPro domains available for this sequence

No external refs found!