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  5. lcl|VRMN01000019.1_cds_KAA8490781.1_6037

lcl|VRMN01000019.1_cds_KAA8490781.1_6037 (KAA8490781)


Aliases : KAA8490781

Description : Vegetative incompatibility protein HET-E-1


Gene families : OG_01_0001864 (OrthoFinder) Phylogenetic Tree(s): OG0001864_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000019.1_cds_KAA8490781.1_6037
Cluster HCCA: Cluster_46


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 253 291
IPR001680 WD40_repeat 88 123
IPR001680 WD40_repeat 169 207
IPR001680 WD40_repeat 43 81
IPR001680 WD40_repeat 128 165
IPR001680 WD40_repeat 6 39
IPR001680 WD40_repeat 211 249
No external refs found!