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  5. lcl|VRMN01000017.1_cds_KAA8490914.1_6117

lcl|VRMN01000017.1_cds_KAA8490914.1_6117 (KAA8490914)


Aliases : KAA8490914

Description : Proteasome subunit alpha type-1


Gene families : OG_01_0002071 (OrthoFinder) Phylogenetic Tree(s): OG0002071_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000017.1_cds_KAA8490914.1_6117
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre06.g304300 30779553, POA6 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder
EOD17162 No alias Proteasome, subunit alpha/beta [Interproscan]. 0.02 OrthoFinder
PTI_08G04270.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.02 OrthoFinder
PTI_08G04350.1 No alias Proteasome, subunit alpha/beta; Proteasome... 0.03 OrthoFinder
Sro17_g012260.1 Contig269.g3405 Proteasome subunit alpha type-1 0.02 OrthoFinder
Vocar.0020s0163.1 32886732 Proteasome alpha-subunit, N-terminal domain; Proteasome,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 203
IPR000426 Proteasome_asu_N 6 28
No external refs found!