Aliases : KAA8492229
Description : DNA-directed RNA polymerase III subunit RPC1
Gene families : OG_01_0000697 (OrthoFinder) Phylogenetic Tree(s): OG0000697_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: lcl|VRMN01000010.1_cds_KAA8492229.1_5412 | |
Cluster | HCCA: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000241.15 | tig00000241_g20874.t1 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00022075.5 | tig00022075_g23567.t1 | DNA-directed RNA polymerase III subunit 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
Dusal.0157s00011.1 | 33200035 | RNA polymerase Rpb1, domain 1; RNA polymerase, alpha... | 0.02 | OrthoFinder | |
OT_10G01340.1 | No alias | RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1,... | 0.02 | OrthoFinder | |
PTI_12G01840.1 | No alias | RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1,... | 0.02 | OrthoFinder | |
XM_002503483.1 | MICPUN_94662, 94662 | RNA polymerase Rpb1, domain 6; RNA polymerase Rpb1,... | 0.02 | OrthoFinder | |
lcl|LHPG02000007.1_cds_PRW57000.1_9043 | PRW57000 | DNA-directed RNA polymerase II subunit 1 | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0004358 | glutamate N-acetyltransferase activity | IEP | Enrichment |
MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | Enrichment |
MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Enrichment |
MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Enrichment |
CC | GO:0005643 | nuclear pore | IEP | Enrichment |
BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Enrichment |
BP | GO:0006525 | arginine metabolic process | IEP | Enrichment |
BP | GO:0006526 | arginine biosynthetic process | IEP | Enrichment |
BP | GO:0006886 | intracellular protein transport | IEP | Enrichment |
BP | GO:0008104 | protein localization | IEP | Enrichment |
MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
MF | GO:0008276 | protein methyltransferase activity | IEP | Enrichment |
MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009451 | RNA modification | IEP | Enrichment |
BP | GO:0015031 | protein transport | IEP | Enrichment |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | Enrichment |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | Enrichment |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
MF | GO:0018024 | histone-lysine N-methyltransferase activity | IEP | Enrichment |
CC | GO:0019867 | outer membrane | IEP | Enrichment |
CC | GO:0030117 | membrane coat | IEP | Enrichment |
CC | GO:0030126 | COPI vesicle coat | IEP | Enrichment |
BP | GO:0031123 | RNA 3'-end processing | IEP | Enrichment |
BP | GO:0031124 | mRNA 3'-end processing | IEP | Enrichment |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Enrichment |
CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
BP | GO:0033036 | macromolecule localization | IEP | Enrichment |
MF | GO:0042054 | histone methyltransferase activity | IEP | Enrichment |
BP | GO:0045184 | establishment of protein localization | IEP | Enrichment |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Enrichment |
BP | GO:0046907 | intracellular transport | IEP | Enrichment |
CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Enrichment |
BP | GO:0051641 | cellular localization | IEP | Enrichment |
BP | GO:0051649 | establishment of localization in cell | IEP | Enrichment |
BP | GO:0071702 | organic substance transport | IEP | Enrichment |
BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Enrichment |
No external refs found! |