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  5. lcl|VRMN01000009.1_cds_KAA8492516.1_9209

lcl|VRMN01000009.1_cds_KAA8492516.1_9209 (KAA8492516)


Aliases : KAA8492516

Description : Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod


Gene families : OG_01_0006740 (OrthoFinder) Phylogenetic Tree(s): OG0006740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000009.1_cds_KAA8492516.1_9209
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
lcl|VRMN01000015.1_cds_KAA8491180.1_5808 KAA8491180 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0030089 phycobilisome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0004655 porphobilinogen synthase activity IEP Enrichment
MF GO:0004743 pyruvate kinase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030955 potassium ion binding IEP Enrichment
MF GO:0031420 alkali metal ion binding IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR008213 CpcD-like_dom 322 362
IPR001297 PBS_linker_dom 76 200
No external refs found!