lcl|VRMN01000009.1_cds_KAA8492476.1_9169 (KAA8492476)

Aliases : KAA8492476

Description : DExH-box ATP-dependent RNA helicase DExH11

Gene families : OG_01_0000182 (OrthoFinder) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: lcl\|VRMN01000009.1_cds_KAA8492476.1_9169
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Cre01.g027150	30789072	RNA processing.organelle machineries.RNA...	0.01	OrthoFinder
Dusal.0199s00002.1	33199095	ATP-dependent RNA helicase Ski2, C-terminal; DEAD/DEAH...	0.02	OrthoFinder
Sro345_g122480.1	Contig2266.g18807	Viralicidic activity 2-like 2	0.01	OrthoFinder
Sro587_g171320.1	Contig2233.g18555	Viralicidic activity 2-like 2	0.02	OrthoFinder
TP06G02960.1	No alias	ATP-dependent RNA helicase Ski2, C-terminal; Helicase,...	0.01	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61094.1_711	PRW61094	Superkiller viralicidic activity 2-like 2 isoform B	0.02	OrthoFinder
lcl\|LHPG02000001.1_cds_PRW61095.1_712	PRW61095	Superkiller viralicidic activity 2-like 2 isoform A	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Enrichment
MF	GO:0004379	glycylpeptide N-tetradecanoyltransferase activity	IEP	Enrichment
MF	GO:0004540	ribonuclease activity	IEP	Enrichment
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Enrichment
MF	GO:0005484	SNAP receptor activity	IEP	Enrichment
MF	GO:0005543	phospholipid binding	IEP	Enrichment
BP	GO:0006528	asparagine metabolic process	IEP	Enrichment
BP	GO:0006529	asparagine biosynthetic process	IEP	Enrichment
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Enrichment
MF	GO:0008289	lipid binding	IEP	Enrichment
MF	GO:0008531	riboflavin kinase activity	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Enrichment
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Enrichment
MF	GO:0019107	myristoyltransferase activity	IEP	Enrichment
CC	GO:0030117	membrane coat	IEP	Enrichment
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Enrichment
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Enrichment
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Enrichment
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Enrichment
MF	GO:0060090	molecular adaptor activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	372	518
IPR012961	Ski2_C	1117	1290
IPR025696	rRNA_proc-arch_dom	808	1090

External Links

No external refs found!