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Aliases : KAA8492445
Description : Transcription factor MYB44
Gene families : OG_01_0000018 (OrthoFinder) Phylogenetic Tree(s): OG0000018_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000009.1_cds_KAA8492445.1_9138 | |
| Cluster | HCCA: Cluster_5 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000663.2 | tig00000663_g2933.t1 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder | |
| EOD17696 | No alias | Myb-like DNA-binding domain [Interproscan]. | 0.03 | OrthoFinder | |
| EOD36865 | No alias | SANT/Myb domain [Interproscan]. | 0.02 | OrthoFinder | |
| XM_003057461.1 | MicpuC2_39026, 39026 | Myb-like DNA-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|BLLF01000460.1_cds_GFH12021.1_6498 | HaLaN_07639, GFH12021 | Transcription factor MYB98 | 0.02 | OrthoFinder | |
| lcl|VRMN01000001.1_cds_KAA8498941.1_7894 | KAA8498941 | Transcriptional activator Myb | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0009916 | alternative oxidase activity | IEP | Enrichment |
| BP | GO:0015074 | DNA integration | IEP | Enrichment |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Enrichment |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Enrichment |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | Enrichment |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043169 | cation binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0046872 | metal ion binding | IEP | Enrichment |
| MF | GO:0046914 | transition metal ion binding | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001005 | SANT/Myb | 379 | 425 |
| No external refs found! |