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  5. lcl|VRMN01000009.1_cds_KAA8492438.1_9131

lcl|VRMN01000009.1_cds_KAA8492438.1_9131 (KAA8492438)


Aliases : KAA8492438

Description : TraB domain-containing protein


Gene families : OG_01_0000457 (OrthoFinder) Phylogenetic Tree(s): OG0000457_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000009.1_cds_KAA8492438.1_9131
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000248.71 tig00000248_g21830.t1 No description available 0.02 OrthoFinder
Sro40_g024790.1 Contig335.g4486 TraB domain-containing protein 0.01 OrthoFinder
TP08G04050.1 No alias TraB family [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
CC GO:0005681 spliceosomal complex IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
InterPro domains Description Start Stop
IPR002816 TraB/PrgY/GumN_fam 70 303
No external refs found!