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  5. lcl|VRMN01000008.1_cds_KAA8492830.1_2566

lcl|VRMN01000008.1_cds_KAA8492830.1_2566 (KAA8492830)


Aliases : KAA8492830

Description : Tryptophan--tRNA ligase, cytoplasmic


Gene families : OG_01_0002805 (OrthoFinder) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8492830.1_2566
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
lcl|LHPG02000001.1_cds_PRW61499.1_95 PRW61499 Tryptophan-tRNA cytoplasmic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0016278 lysine N-methyltransferase activity IEP Enrichment
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030880 RNA polymerase complex IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0042054 histone methyltransferase activity IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
CC GO:0090730 Las1 complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 103 391
No external refs found!