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  5. lcl|VRMN01000008.1_cds_KAA8492737.1_2473

lcl|VRMN01000008.1_cds_KAA8492737.1_2473 (KAA8492737)


Aliases : KAA8492737

Description : ATP-dependent RNA helicase dbp2


Gene families : OG_01_0000110 (OrthoFinder) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8492737.1_2473
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
EOD05367 No alias Helicase, C-terminal; DEAD/DEAH box helicase domain... 0.02 OrthoFinder
Sro2383_g325640.1 Contig4229.g32074 Dependent RNA helicase 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56606.1_9693 PRW56606 DEAD-box ATP-dependent RNA helicase 20 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR001650 Helicase_C 407 517
IPR011545 DEAD/DEAH_box_helicase_dom 196 367
No external refs found!