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  5. lcl|VRMN01000008.1_cds_KAA8492718.1_2454

lcl|VRMN01000008.1_cds_KAA8492718.1_2454 (KAA8492718)


Aliases : KAA8492718

Description : Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic


Gene families : OG_01_0002042 (OrthoFinder) Phylogenetic Tree(s): OG0002042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000008.1_cds_KAA8492718.1_2454
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Dusal.0025s00007.1 33200676 Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
OT_03G03200.1 No alias Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
PTI_17G02750.1 No alias Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.04 OrthoFinder
Sro443_g144070.1 Contig715.g8253 Oxygen-dependent coproporphyrinogen-III oxidase 0.03 OrthoFinder
TP01G11520.1 No alias Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54910 54910 Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.02 OrthoFinder
Vocar.0028s0183.1 32895648 Coproporphyrinogen III oxidase, aerobic [Interproscan]. 0.03 OrthoFinder
XM_002501187.1 MICPUN_104790, 104790 Coproporphyrinogen III oxidase chloroplast precursor (HEMF) 0.04 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59269.1_6938 PRW59269 Coproporphyrinogen III oxidase chloroplast precursor 0.02 OrthoFinder
lcl|LHPG02000015.1_cds_PRW34019.1_3059 PRW34019 Coproporphyrinogen III oxidase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEA Interproscan
BP GO:0006779 porphyrin-containing compound biosynthetic process IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010024 phytochromobilin biosynthetic process IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0015994 chlorophyll metabolic process IEP Enrichment
BP GO:0015995 chlorophyll biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016851 magnesium chelatase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Enrichment
MF GO:0050897 cobalt ion binding IEP Enrichment
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Enrichment
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051202 phytochromobilin metabolic process IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001260 Coprogen_oxidase_aer 108 407
No external refs found!