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  5. lcl|VRMN01000007.1_cds_KAA8493159.1_9460

lcl|VRMN01000007.1_cds_KAA8493159.1_9460 (KAA8493159)


Aliases : KAA8493159

Description : Cytochrome c oxidase subunit 6b-1


Gene families : OG_01_0004866 (OrthoFinder) Phylogenetic Tree(s): OG0004866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000007.1_cds_KAA8493159.1_9460
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Sro341_g121360.1 Contig3952.g30268 Oxidase subunit 6B 0.02 OrthoFinder
Sro965_g225650.1 Contig945.g9794 Oxidase subunit 6B 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005787 signal peptidase complex IEP Enrichment
BP GO:0006405 RNA export from nucleus IEP Enrichment
BP GO:0006406 mRNA export from nucleus IEP Enrichment
BP GO:0006465 signal peptide processing IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Enrichment
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Enrichment
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
CC GO:0033176 proton-transporting V-type ATPase complex IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0050657 nucleic acid transport IEP Enrichment
BP GO:0050658 RNA transport IEP Enrichment
BP GO:0051028 mRNA transport IEP Enrichment
BP GO:0051168 nuclear export IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051236 establishment of RNA localization IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
CC GO:1905368 peptidase complex IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR003213 Cyt_c_oxidase_su6B 21 77
No external refs found!