lcl|VRMN01000006.1_cds_KAA8493825.1_4587 (KAA8493825)

Aliases : KAA8493825

Description : Cryptochrome DASH, chloroplastic/mitochondrial

Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: lcl|VRMN01000006.1_cds_KAA8493825.1_4587
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020965.69 tig00020965_g16882.t1 Cryptochrome DASH, chloroplastic/mitochondrial... 0.01 OrthoFinder
Cre02.g078939 30785814 Cryptochrome DASH, chloroplastic/mitochondrial... 0.01 OrthoFinder
Cz04g35200.t1 No alias Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. 0.02 OrthoFinder
Cz04g36010.t1 No alias DNA photolyase, N-terminal [Interproscan]. 0.02 OrthoFinder
Cz05g19270.t1 No alias DNA photolyase, N-terminal [Interproscan]. 0.02 OrthoFinder
Cz09g17160.t1 No alias DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... 0.02 OrthoFinder
XM_003061182.1 MicpuC2_19486, 19486 Cryptochrome/DNA photolyase, FAD-binding domain; DNA... 0.02 OrthoFinder
lcl|LHPG02000005.1_cds_PRW58276.1_7960 PRW58276 Blue-light photoreceptor PHR2 0.02 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39254.1_2665 PRW39254 Cryptochrome DASH 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004651 polynucleotide 5'-phosphatase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005886 plasma membrane IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
CC GO:0017119 Golgi transport complex IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030173 integral component of Golgi membrane IEP Enrichment
CC GO:0031228 intrinsic component of Golgi membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0098518 polynucleotide phosphatase activity IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 385 572
IPR006050 DNA_photolyase_N 87 255
No external refs found!