1. Home
  2. Species
  3. Porphyridium purpureum
  4. Sequence
  5. lcl|VRMN01000006.1_cds_KAA8493547.1_4309

lcl|VRMN01000006.1_cds_KAA8493547.1_4309 (KAA8493547)


Aliases : KAA8493547

Description : Ferredoxin--nitrite reductase, chloroplastic


Gene families : OG_01_0002779 (OrthoFinder) Phylogenetic Tree(s): OG0002779_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: lcl|VRMN01000006.1_cds_KAA8493547.1_4309
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020941.42 tig00020941_g16234.t1 Ferredoxin--nitrite reductase, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00020941.43 tig00020941_g16234.t1 Ferredoxin--nitrite reductase, chloroplastic... 0.02 OrthoFinder
Cre09.g410750 30780283, NII1 Nutrient uptake.nitrogen assimilation.nitrate... 0.02 OrthoFinder
Cz12g08110.t1 No alias Nitrite/sulphite reductase 4Fe-4S domain;... 0.03 OrthoFinder
Dusal.0498s00010.1 33193561 Nitrite/Sulfite reductase ferredoxin-like domain;... 0.03 OrthoFinder
Dusal.0498s00011.1 33193568 Nitrite/sulphite reductase 4Fe-4S domain [Interproscan]. 0.02 OrthoFinder
OT_10G00910.1 No alias Nitrite/Sulfite reductase ferredoxin-like domain;... 0.04 OrthoFinder
PTI_09G03500.1 No alias Nitrite/sulphite reductase 4Fe-4S domain;... 0.02 OrthoFinder
Sro70_g038780.1 Contig3352.g26225 Ferredoxin--nitrite reductase, chloroplastic (Fragment) 0.04 OrthoFinder
Transcript_contig_79358 79358 Nitrite/Sulfite reductase ferredoxin-like domain;... 0.04 OrthoFinder
XM_002507465.1 MICPUN_113259, 113259 Nadh-nitrite reductase (Nii) 0.04 OrthoFinder
XM_003057895.1 MicpuC2_70828, 70828 Nitrite reductase fusion with b5r chloroplast precursor (NII) 0.06 OrthoFinder
lcl|BLLF01001585.1_cds_GFH20159.1_14636 HaLaN_17238, GFH20159 Ferredoxin-nitrite reductase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
MF GO:0019825 oxygen binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 450 561
IPR005117 NiRdtase/SiRdtase_haem-b_fer 371 434
IPR005117 NiRdtase/SiRdtase_haem-b_fer 114 180
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 190 346
No external refs found!