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Aliases : KAA8493494
Description : Putative dimethyladenosine transferase
Gene families : OG_01_0000842 (OrthoFinder) Phylogenetic Tree(s): OG0000842_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: lcl|VRMN01000006.1_cds_KAA8493494.1_4256 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre01.g042900 | 30789042 | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | OrthoFinder | |
| Sro2218_g319550.1 | Contig3225.g25511 | Probable dimethyladenosine transferase | 0.01 | OrthoFinder | |
| Transcript_contig_2900 | 2900 | Ribosomal RNA adenine methyltransferase KsgA/Erm [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Enrichment |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| MF | GO:0004140 | dephospho-CoA kinase activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004181 | metallocarboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| BP | GO:0006302 | double-strand break repair | IEP | Enrichment |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Enrichment |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Enrichment |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Enrichment |
| BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Enrichment |
| BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
| MF | GO:0016872 | intramolecular lyase activity | IEP | Enrichment |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Enrichment |
| BP | GO:0017007 | protein-bilin linkage | IEP | Enrichment |
| BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Enrichment |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| CC | GO:0030686 | 90S preribosome | IEP | Enrichment |
| CC | GO:0030688 | preribosome, small subunit precursor | IEP | Enrichment |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
| MF | GO:0032977 | membrane insertase activity | IEP | Enrichment |
| BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | Enrichment |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Enrichment |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001737 | KsgA/Erm | 27 | 240 |
| No external refs found! |